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Ferguson JT, Solà E, Perez MA, Piano S, Cheng AG, Subramanian A, Kim WR. Infections in decompensated cirrhosis: Pathophysiology, management, and research agenda. Hepatology Communications 8(10):e0539, October 2024.
Link: https://doi.org/10.1097/HC9.0000000000000539
Huynh S, Achalu S, Berry R, Lin J, Wang CX, Gubatan J, Cheng AG. Some Drugs Have Two Faces: Paradoxical Colitis in a Patient with Psoriatic Arthritis Previously Treated with Etanercept and IL-17 Inhibitors. Dig Dis Sci (2024).
Link: https://doi.org/10.1007/s10620-024-08380-2
Nagashima K, Zhao A, Atabakhsh K, Bae M, Blum JE, Weakley A, Jain S, Meng X, Cheng AG, Wang M, Higginbottom S, Dimas A, Murugkar P, Sattely ES, Moon JJ, Balskus EP, Fischbach MA. Mapping the T cell repertoire to a complex gut bacterial community. Nature. 2023 Sep;621(7977):162-170. doi: 10.1038/s41586-023-06431-8. Epub 2023 Aug 16. PMID: 37587342.
Link: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10948025/
Wang M, Osborn LJ, Jain S, Meng X, Weakley A, Yan J, Massey WJ, Varadharajan V, Horak A, Banerjee R, Allende D, Chan RE, Hajjar AM, Dimas A, Zhao A, Nagashima K, Cheng AG, Higginbottom S, Brown JM, Fischbach MA. Strain dropouts reveal interactions that govern the metabolic output of the gut microbiome. Cell. 2023 Jun 22;186(13):2839-2852.e21. PMID: 37352836
Link: https://www.sciencedirect.com/science/article/pii/S0092867423005895?via%3Dihub
Cheng AG, Ho PY, Aranda-Diaz A, Jain S, Yu F, Meng X, Wang M, Iakiviak M, Nagashima K, Zhao A, Murugkar P, Patil A, Atabakhsh K, Weakley A, Yan J, Brumbaugh A, Higginbottom S, Dimas A, Shiver AL, Deutschbauer A, Neff N, Sonnenburg J, Huang KC, Fischbach MA. Design, construction, and in vivo augmentation of a complex gut microbiome. Cell. 2022. Sep 1;S0092-8674(22)00990-4. PMID: 36070752.
Link: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC9691261/
Cheng AG, Aranda-Díaz A, Jain S, Yu F, Iakiviak M, Meng X, Weakley A, Patil A, Shiver AL, Deutschbauer A, Neff N, Huang KC, Fischbach MA. Systematic dissection of a complex gut bacterial community. bioRxiv. 2022.
Link: https://www.biorxiv.org/content/10.1101/2021.06.15.448618v1.
Cheng AG, Oxford EC, Sauk J, Nguyen DD, Yajnik V, Friedman S, Ananthakrishnan AN. The impact of mode of delivery on outcomes in patients with perianal Crohn’s disease. Inflamm Bowel Dis. 2014 Aug;20(8):1391-8. PMID 24918322
Link: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4104983/
Cheng AG, Missiakas DM, Schneewind O. The giant protein Ebh is a determinant of Staphylococcus aureus cell size and complement resistance. Journal of Bacteriology. 2014 Mar;196(5):971-81. PMID 24363342
Link: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3957702/
Cheng AG, Dedent AC, Schneewind O, Missiakas D. A play in four acts: Staphylococcus aureus abscess formation. Trends in Microbiology. 2011 May;19(5):225-32. PMID 21353779
Link: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3087859/
Cheng AG, McAdow M, Kim HK, Bae T, Missiakas DM, Schneewind O. Contribution of coagulases towards Staphylococcus aureus disease and protective immunity. PLoS Pathog. 2010 Aug 5;6(8). PMID: PMC2916881
Link: https://journals.plos.org/plospathogens/article?id=10.1371/journal.ppat.1001036
Cheng AG, Kim HK, Burts ML, Krausz T, Schneewind O, Missiakas DM. Genetic requirements for Staphylococcus aureus abscess formation and persistence in host tissues. FASEB J. 2009 Oct;23(10):3393-404. PMID: 19525403
Link: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2747682/